| Autoimmunity |
Bioinformatics |
Biomedical ethics |
Cancer genetics and cell biology including metastasis |
| Cervical cancer |
Commercialisation of scientific research |
Diagnostics |
Endocrine function and disease |
| Environmental Carcinogenesis |
Foetal, maternal and neonatal physiology |
Gene transcription in human cancer |
Gynaecology oncology |
| HASHIMOTO THYROIDITIS |
Immunochemistry and immunogenetics |
Inflammatory bowel disease |
Intra and intercellular signalling |
| Medical Law |
Medical Sciences, Research |
Membrane and protein trafficking |
Oncogenes, apoptosis and tumour development |
| Oral diseases and Oral medicine |
Oral pathology |
Pathophysiology |
Prostate cancer |
| Quantitative and molecular genetics |
RET ONCOGENE ACTIVATION |
RNA processing, stability and degradation |
Regulatory methods of gene expression |
| Role of oestrogens in age related urogenital diseases |
SIGNAL TRANSDUCTION |
TAQMAN RT-PCR |
TYROSINE PHOSPHORYLATION |
| Thyroid Cancer |
Tumour immunology and immunotherapy |
Virology and viral pathogenesis |
| Project title |
Current Projects |
| Summary |
Irish Cancer Society Prostate Cancer Research Consortium 2011-2016
Work Package 3: Integrated mRNA and miRNA
signatures Sheils O- [coPI]
• Merck Serono
Validation of k-ras testing in colorectal samples Sheils O [PI] €5000 2011-12
• Amgen
Validation of KRAS detection in colorectal samples Sheils O [PI] €5000 2011-12
• BDI 2 CSET (Onc 1 project) SFI Sheils O [co-investigator]
Total €19.2M TCD component €991K 2010-1015
• EU 7th FP grant (FP7-HEALTH-2007-A) Sheils O [co-investigator]
‘Automatic Cancer Screening Based on real-time
PCR’ “AutoCast”
Total €4,188,503.00 TCD component €682K
2010-2013
• EU 7th FP grant (FP7-HEALTH-2007-A) Sheils O [co-investigator]
Project number 257073
PASCA—Platform for Advanced Single Cell-Manipulation and Analysis
Total €3,000,000 TCD component €700K 2010-2013
• EU 7th FP grant (FP7-HEALTH-2010-Cp-FP) Sheils O [PI]
Project Number: 258759-2
Fast Automated Multiplex Analysis of Neonatal Sepsis Markers on a Centrifugal Microfluidic
Platform ‘ASCMicroPlat’
Total €2,452,517 TCD component €686K 2011-2015
• The Irish Cancer Society [2008-2012]
• Sheils O [co-PI]
‘Hsa-miR-141 and hsa-miR-223 are central to Ovarian Serous Carcinoma Pathogenesis through regulation of JAG1 and SMARCD1 proteins’
Role: Co-Principal Investigator
• The Emer Casey Foundation [2008-2012] Sheils O [co-investigator]
‘ The role of hypoxia in chemoresistance in ovarian cancer’
Role: Co-Investigator
• The Emer Casey Foundation [2008-2012] Sheils O [co-investigator]
‘Discovering novel signatures of early ovarian cancer’
Role: Co-Investigator
• Health Research Board [2004-2012]
Sheils O [co-P.I.]
‘PhD training site grant’
Role: Co-Principal Investigator
• HRB_HRA/2012/82 Sheils O [co-investigator]
2012 - 2015, Title: "Understanding the role of cancer stem-like cells in resistance to radiation using a clinically-relevant model of radioresistance in oesophageal adenocarcinoma". €291,357. |
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| Project title |
Molecular Pathology of Thyroid Disease |
| Summary |
Current research being undertaken by our group aspires to elucidate the relationship between ret/PTC-1 activation and its associated morphological patterns, by investigating the link between ret/PTC-1 activation and expression of cell adhesion molecules such as E-Cadherin, and the catenin family of proteins. An associated project is underway to characterise ret/PTC3 positive papillary thyroid carcinomas and correlate the findings with disease manifestation.
The focus of the proposed study is to broaden the scope of the current research, by using genome wide analysis of diagnostic cohorts of thyroid tumours, to attempt to integrate morphologic and molecular biological findings as suggested by Rosai et al. This would culminate in the establishment of functional genomics of diagnostic cohorts. . It will comprehensively determine levels of expression of gene targets across a spectrum of thyroid disease - from normal, through autoimmune thyroiditis to papillary thyroid carcinoma and its variants (Follicular variant, Tall cell variant, Columnar cell variant, Hurthle cell papillary carcinoma) using comparative genomic hybridisation (CGH) and micro-array technology.
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| Funding Agency |
CRI, HRB, Applied Biosystems |
| Programme |
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| Date from |
2000 |
| Date to |
2010 |
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| Project title |
Head and Neck Oncology |
| Summary |
Investigators:
Dr. Esther O’Regan (PhD Candidate)
Dr. Mary Toner
Prof. Conrad Timon
Dr. Orla Sheils
Prof. John O’Leary
Head and neck squamous cell carcinoma (HNSCC) is an aggressive epithelial malignancy that is the sixth most common neoplasm in the world today. This tumour usually afflicts middle to older-aged individuals with a history of tobacco and alcohol use. However recent evidence suggests that there is an increased incidence of HNSCC in individuals in patients under the age of 40, who have not been chronic users of tobacco and alcohol. Genome wide evaluation of tumours is possible. Our group plans to determine the molecular genetic alterations associated with HNSCC in young people, and compare it to those in an older population. Rather than compare the commonly altered chromosomal regions in typical HNSCC, with the same regions in HNSCC affecting a younger population, we plan to perform a genome wide analysis of HNSCC in a cohort of young individuals, in order to identify potential candidate genes that may be significant in the tumorigenesis occurring in this young population. The hypothesis is that HNSCC in young patients (without significant risk factors) is a distinct disease. |
| Funding Agency |
CRI |
| Programme |
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| Type of Project |
basic research |
| Date from |
2002 |
| Date to |
2006 |
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| Project title |
Molecular Markers in Cervical Cancer |
| Summary |
Recently, our group in the Department of Histopathology has identified a novel set of molecular markers for use in cervical screening programmes. The markers include HPV type, load and integration status, cdc6 and mcm5 expression, telomerase expression and telomeric stabilization/lengthening. Preliminary data suggests that cdc6 and mcm5 (proteins involved in DNA replication) selectively mark dyskaryotic cells in smears and tissue biopsies. The ability to isolate individual dyskaryotic cells from CIN/cGIN and malignant cells from squamous and glandular carcinomas can now be achieved using LCM technology. The above investigators will attempt to identify the mechanism of cdc6 and mcm5 localisation in the nuclei of dyskaryotic cells, and in tandem will examine the influence of HPV infection, telomerase expression and telomeric lengthening/stabilization on such localization phenomena. The experiments will involve geographical isolation and CGH array analysis of cells in CIN 1,2,3,cGIN and invasive squamous and glandular carcinomas of the cervix. |
| Funding Agency |
HRB, CRI, Applied Biosystems |
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| Project title |
Molecular Profiling in Prostate Cancer |
| Summary |
The purpose of this project is to study the genetic profile of pre-invasive prostatic neoplasia and subsequent stages of prostatic carcinoma in order to identify genetic discriminators of disease progression. This knowledge could form the basis for the development of new treatment strategies.
Prostate cancer is a major world-wide problem, and is the second commonest cancer in men in Ireland. The number of newly diagnosed cases has increased in men of all ages. Prostate cancer has a high mortality rate, and accounts for almost 500 deaths in Ireland annually. The number of deaths is increasing by 3.5% per annum. The rising mortality rate may be due to a number of factors, including undertreatment.
One of the major problems and challenges in prostate carcinoma is to predict the outcome of individual patients.
Diagnosis of prostatic carcinoma is usually made on prostate biopsy, performed for a raised PSA. In addition, prostatic carcinoma may be diagnosed incidentally in transurethreal prostatic resection (TURP) specimens, performed for benign prostatic disease. Such tumours appear to be biologically more indolent compared with clinically suspected prostate cancers, and this may be due due a different genetic profile. There is no laboratory test currently available which will predict progression of disease.
Knowledge of genetic changes underlying initiation, development and progression of prostate carcinoma is limited, and no specific genetic event has yet been identified. We hypothesise that demonstration of chromosomal gains and losses using CGH micro-array technology may identify genetic markers for disease progression. |
| Funding Agency |
AMNCH trust, Applied Biosystems |
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| More Research Projects>>> |
Nucera C, Eeckhoute J, Finn S, Carroll JS, Ligon AH, Priolo C, Fadda G, Toner M, Sheils O, Attard M, Pontecorvi A, Nose V, Loda M, Brown M., FOXA1 is a potential oncogene in anaplastic thyroid carcinoma, Clinical Cancer Research, 15, (11), 2009, p3680-3689 Notes: [PMID: 19470727] Url TARA - Full Text DOI |
| More Publications and Other Research Outputs >>> |
Contact:helpdesk@tcd.ie Last Updated:18-JUN-2013 |