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Dr. Carsten Kroger

Assistant Professor (Microbiology)

 Carsten.Kroeger@tcd.ie

 3531896 1414/1345


Research Tags

  ACINETOBACTER   BACTERIA   GENE REGULATION   MICROBIOLOGY   MOLECULAR GENETICS   SALMONELLA

Languages

Language Skill Reading Skill Writing Skill Speaking
English Fluent Fluent Fluent
German Fluent Fluent Fluent

Memberships

Membership of Professional Institutions, Associations, Societies

Details Date From Date To
Microbiology Society 2010
American Society for Microbiology 2010
European Society of Clinical Microbiology and Infectious Diseases 2015
Society for Applied Microbiology 2019
Kumwenda B, Canals R, Predeus AV, Zhu X, Kröger C, Pulford C, Wenner N, Lora LL, Li Y, Owen SV, Everett D, Hokamp K, Heyderman RS, Ashton PM, Gordon MA, Msefula CL, Hinton JCD, Salmonella enterica serovar Typhimurium ST313 sublineage 2.2 has emerged in Malawi with a characteristic gene expression signature and a fitness advantage., Microlife, 2024, Journal Article, PUBLISHED  DOI
Felsl A, Brokatzky D, Kröger C, Heermann R, Fuchs TM., Hierarchic regulation of a metabolic pathway: H-NS, CRP, and SsrB control myo-inositol utilization by Salmonella enterica., Microbiology spectrum, 12, (1), 2024, pe0272423 , Journal Article, PUBLISHED  DOI
Faulkner Rainford P, Mogre A, Velasco-Berrelleza V, Dorman CJ, Harris S, Kröger C, Stepney S, A Pi-calculus Model of Supercoiling DNA Circuits, ALIFE 2023: Ghost in the Machine: Proceedings of the 2023 Artificial Life Conference, MIT Press, 2023, Conference Paper, PUBLISHED
Kröger C, Lerminiaux NA, Ershova AS, MacKenzie KD, Kirzinger MW, Märtlbauer E, Perry BJ, Cameron ADS, Schauer K., Plasmid-encoded lactose metabolism and mobilized colistin resistance (mcr-9) genes in Salmonella enterica serovars isolated from dairy facilities in the 1980s., Microbial genomics, 9, (11), 2023, Journal Article, PUBLISHED  DOI
Shaban L, Ershova AS, Hamrock FJ, Shaibah A, Sulimani MM, Amin RA, Russell JN, Ravichandran R, Schaffer K, Martins M, Cameron ADS, Kröger C, Draft Genome Sequence and Annotation of Acinetobacter soli AS15, Isolated from an Irish Hospital, Microbiology Resource Announcement, 2021, Journal Article, PUBLISHED  DOI
Owen SV, Canals R, Wenner N, Hammarlöf DL, Kröger C and Hinton JCD, A window into lysogeny: Revealing temperate phage biology with transcriptomics, Microbial Genomics, 2020, Journal Article, PUBLISHED  DOI
Pulford CV, Wenner N, Redway ML, Rodwell EV, Webster HJ, Escudero R, Kröger C, Canals R, Rowe W, Lopez J, Hall N, Rowley PD, Timofte D, Harrison RA, Baker KS and Hinton JCD, The diversity, evolution and ecology of Salmonella in venomous snakes, PLoS Neglected Tropical Diseases, 2019, Journal Article, PUBLISHED  DOI
Canals R, Hammarlöf DL, Kröger C, Owen SV, Fong WY, Lacharme-Lora L, Zhu X, Wenner N, Carden SE, Honeycutt J, Monack DM, Kingsley RA, Brownridge P, Chaudhuri RR, Rowe WPM, Predeus AV, Hokamp K, Gordon MA, Hinton JCD., Adding function to the genome of African Salmonella Typhimurium ST313 strain D23580., PLoS biology, 17, (1), 2019, pe3000059 , Journal Article, PUBLISHED  DOI
Kröger C, Schauer K, Clerkin S, Maertlbauer E and Fleming AB, Draft Genome Sequence and Annotation of Acinetobacter junii MHI21018, Isolated from Bovine Colostrum, Microbiology Resource Announcements, 2019, Journal Article, PUBLISHED  DOI
Kröger C, MacKenzie KD, Alshabib EY, Kirzinger MWB, Suchan DM, Chao TC, Akulova V, Miranda-CasoLuengo AA, Monzon VA, Conway T, Sivasankaran SK, Hinton JCD, Hokamp K, Cameron ADS., The primary transcriptome, small RNAs and regulation of antimicrobial resistance in Acinetobacter baumannii ATCC 17978., Nucleic Acids Research, 2018, Journal Article, PUBLISHED  DOI
  

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Mogre A, Dorman CJ, Kröger C, A first look at DNA supercoiling in Acinetobacter, DAPI 2024, Trinity College Dublin, 7 July, 2024, Poster, PUBLISHED
Plunkett O, Debruyne C, Salcedo SP, Kröger C, Plasmid mediated aminoglycoside resistance in Acinetobacter baumannii AB5075, DAPI 2024, Dublin, 2024, Poster, PRESENTED
Nolan R, Kröger C, Initial Characterisation of the Twin-Arginine Translocation System in Acinetobacter baumannii AB5075 and ABC141, DAPI 2024, 2024, Poster, PRESENTED
Hamrock FJ, Ryan D, Westermann AJ, Hokamp K, Kröger C, Functional Characterisation of small RNAs in Acinetobacter baumannii, DAPI 2024, 2024, Poster, PRESENTED
Hamrock FJ, Ryan D, Shaibah A, Ershova AS, Mogre A, Sulimani MM, Reichardt S, Hokamp K, Westermann AJ, Kröger C, Global analysis of the RNA-RNA interactome in Acinetobacter baumannii AB5075 uncovers a small regulatory RNA repressing the virulence-related outer membrane protein CarO, bioRxiv, (2023.12. 04.569942), 2023, Journal Article, PUBLISHED
Hamrock FJ, Ryan D, Shaibah A, Ershova A, Mogre A,Reichardt S, Hokamp K, Westermann AJ, Kröger C, GRIL-seq uncovers a posttranscriptional regulator of CarO and BfnH in Acinetobacter baumannii AB5075, 13th Symposium on the Biology of Acinetobacter, Coimbra, Portugal, 2023, Poster, PRESENTED
Sulimani MM, Shaibah A, Ershova A, Kröger C, Transcriptomic analysis of A. baumannii AB5075 with (differential)-RNA sequencing, 13th Symposium on the Biology of Acinetobacter, Coimbra, Portugal, 2023, Poster, PRESENTED
Plunkett O, Kröger C, Characterisation of Chloramphenicol Resistance Genes in Acinetobacter baumannii, 13th Symposium on the Biology of Acinetobacter, Coimbra, Portugal, 2023, Poster, PRESENTED
Nolan R, Matthews MR, Kröger C, Initial characterisation of the twin-arginine translocation system in Acinetobacter baumannii AB5075, 13th Symposium on the Biology of Acinetobacter, Coimbra, Portugal, 2023, Poster, PRESENTED
Shaibah A, Ershova A, Kröger C, Transcriptional profiling of Acinetobacter baumannii during antibiotic and environmental stress, 13th Symposium on the Biology of Acinetobacter, Coimbra, Portugal, 2023, Poster, PRESENTED

  

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Awards and Honours

Award Date
IRC Ulysses Awardee 2021 2021