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Dr. Sharee Basdeo

Assistant Professor (Clinical Medicine)
Assistant Professor (Paediatrics)
      
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Dr. Sharee Basdeo

Assistant Professor (Clinical Medicine)

 

Assistant Professor (Paediatrics)


  Biomedical sciences   Clinical research, trials   Host, Pathogen interactions   Immune system   Infectious diseases   Inflammation and coagulation syndromes   Innate immunology   Medical Sciences, Research   Medicine   PAEDIATRICS
Project Title
 Inducing respiratory trained immunity for TB host defence in the human lung.
From
01/03/2025
To
28/02/2028
Summary
Tuberculosis (TB) is a leading cause of death from an infectious agent. Globally, there has been a marked increase in TB incidence and drug-resistant TB in the past two years. There is an urgent unmet clinical need for host-directed therapeutics and prophylactics capable of inducing effective respiratory immunity against the bacteria that causes TB; Mycobacterium tuberculosis (Mtb). Since the tissue resident alveolar macrophage (AM) is the first cell to encounter Mtb in the human lung, and the cell that becomes chronically infected leading to TB disease, supporting the immune function of this population, and the lung resident cells in proximity, is a rational therapeutic strategy to promote immune defence against Mtb infection. Myeloid cells from the bone marrow have a capacity to be `trained" towards enhanced host defence. Our recent work has shown that a COVID- 19 adenovirus-vectored vaccine 'trained' monocytes towards enhanced non-specific immune responses to Mtb. Our collaborator showed that aerosolised delivery of an adenovirus vectored vaccine against Mtb elicited immunity in the lung whereas intramuscular vaccination did not. Evidence from murine models of respiratory mucosal adenovirus vaccination indicates that murine AM can be 'trained' resulting in enhanced immunity to bacterial infection mediated by improved kinetics of myeloid cell recruitment. However, a significant knowledge gap human remains as to whether tissue resident human AM can be trained to promote immunity to Mtb, and the mechanisms inducing and propagating trained immunity in the human lung. This project will be the first to define the induction of trained immunity in human AM through evidence of functional and phenotypic changes in the human AM, underpinned by metabolic and epigenetic reprogramming. These crucial data will define the human AM as a critical target for respiratory mucosal prophylactic or therapeutic vaccination, enabling the translation of trained immunity towards the global effort to `End TB".
Funding Agency
Health Research Board
Programme
ILP
Project Type
Research
Person Months
4
Project Title
 Defining the consequences of innate immune training on protective versus pathogenic T cell responses in patients with tuberculosis.
From
01 March 2020
To
28 February 2025
Summary
Tuberculosis (TB) ranks alongside HIV as the world's most deadly infectious disease, killing 1.5 million people every year. It is caused by the bacteria Mycobacterium tuberculosis (Mtb), which primarily infects people's lungs. Treating this disease is becoming more difficult due to antibiotic-resistant Mtb, therefore, scientists are developing ways to boost the immune system to kill Mtb more effectively. Two immune cells that play a prominent role in our ability to fight Mtb are alveolar macrophages (AM) and T cells. AM are the guardians of the lungs and encounter the bacteria first. They try to contain infection by eating and killing the bacteria, and then switching on T cells. However, Mtb can manipulate the AM and live inside it, causing TB disease. T cells are the generals of the immune system, helping to coordinate long term defence. However, in TB, these cells can be a double-edged sword; sometimes they can help clear the infection, but they can also cause collateral damage to the lungs. It was recently discovered that AM can be "trained" to increase their functions (similar to the way training improves an athlete's performance). This improves the AM's ability to kill bacteria. In addition, we have evidence to suggest this training will give clearer signals to the T cells, which will balance the immune response towards clearing the infection, rather than damaging the lungs. This project will compare different training regimens to see which best promotes the killing of Mtb and what affect the training has on T cell responses. By studying the different types of T cells that are activated during Mtb infection, we will determine which response may be harmful to the patient. By better understanding the human immune response during Mtb infection, we will be able to adjust it to help the patient recover from TB.
Funding Agency
Health Research Board
Programme
Emerging Investigator Award
Person Months
12
Project Title
 Defining how innate immune function is impacted long term in people who have had active Tuberculosis.
From
September 2022
To
March 2025
Summary
The Problem Tuberculosis (TB) is a complex disease caused by a bacteria called Mycobacterium tuberculosis (Mtb) and claims the lives of 1.4 million people annually. When a person is exposed to Mtb, their immune response may clear the infection asymptomatically, contain it in a dormant state (called latent TB) or it can grow and replicate inside the macrophage causing active TB disease. The gap in our knowledge TB doesn't play by the rules of the immunity to infection. If you have previously had active TB you are more likely to get sick again with TB than someone who has never had it before and we don't know why. Our proposed solution Our research team study the innate immune response to Mtb and have established ways to therapeutically boost a patient's own immune system to fight off the bug. We think that Mtb may alter the function of the innate immune response long term in people who have previously had TB. This altered function is a bit like a scar that is left after an injury and we propose that this may be the reason why people who have had TB are more vulnerable to getting TB again. We want to define the status of innate immune cells in people who have had TB compared with healthy people in order to determine if their innate immune responses are reprogrammed by the infection. This will enable us to design a therapy aimed at protecting these vulnerable people from contracting TB again.
Funding Agency
Health Research Board
Programme
Investigator led project
Person Months
6
Project Title
  Reprogramming systemic and tissue resident innate immunity post infection to inhibit autoinflammatory events and disease
From
March 2023
To
February 2024
Summary
Funding Agency
Enterprise Ireland
Programme
ERC Support
Person Months
3
Project Title
 Defining prolonged innate immune alterations in people post-acute infection to develop a high-risk, high-gain proposal for an ERC Starting Grant application.
From
01 Oct 2022
To
30 Sept 2023
Summary
Funding Agency
TCD
Programme
Dean's Research Initiatives Award
Person Months
3

Page 1 of 2
Language Skill Reading Skill Writing Skill Speaking
English Fluent Fluent Fluent
Details Date From Date To
European Society for Clinical Microbiology and Infectious Diseases February 2021 present
British Society of Immunology December 2010 present
Irish Society of Immunology September 2010 present
Cilian Ó Maoldomhnaigh, Donal J Cox, Joseph Keane, Sharee A. Basdeo, P-450. Neonatal macrophages have an altered immunometabolic response to Mycobacterium tuberculosis which is modified by IFN-", IL-4 or lactate, 13, (Supplement_1), 2026, Conference Paper, PUBLISHED  DOI
Gráinne Jameson, Isabella Batten, Adam H. Dyer, C. Geoghegan, Moninne Murray, Niamh McDonnell, Dearbhla M Murphy, Sarah A. Connolly, Anne Marie McLaughlin, Cilian Ó Maoldomhnaigh, Laura E. Gleeson, Joseph Keane, Sharee A. Basdeo, Monocyte metabolic plasticity and cytokine production differentiate latent TB infection from active disease, Journal of Infection, 92, (6), 2026, p106755 - 106755, p106755-106755 , Journal Article, PUBLISHED  DOI
Murphy DM, Batten I, O'Farrell A, Carlile SR, O'Rourke SA, Court C, Morris B, Leisching G, Jameson G, Connolly SA, Dyer AH, McGrath JP, McNally E, Basdeo SA, IFN-Y-induced trained immunity enhances killing of priority pathogens in healthy and genetically vulnerable individuals., JCI insight, 2026, Journal Article, PUBLISHED  DOI
Brown K, Walsh A, Yennemadi A, O'Leary S, O'Sullivan M, Nadarajan P, Basdeo S, Leisching G, Keane J, Mycobacterium tuberculosis Induces Warburg Metabolism in Human Alveolar Macrophages: A Transcriptomic Analysis., American Journal of Respiratory Cell and Molecular Biology, 2025, Journal Article, PUBLISHED  DOI
Connolly, Sarah A.; Walsh, Aaron; Ledwith, Anna E.; McCarthy, Karen N.; O'Rourke, Sinead A.; Murphy, Dearbhla M.; Blasinska, Anna; Dunne, Aisling; Fletcher, Jean M.; Mills, Kingston H.G.; McManus, Ross; Sheedy, Frederick J.; Basdeo, Sharee A., BNT162b2 mRNA vaccination attenuates innate immune function in humans, Clinical Immunology, 276, 2025, Notes: [Cited by: 0], Journal Article, PUBLISHED  DOI
Kevin Brown, Aaron M. Walsh, Anjali S Yennemadi, Dearbhla M Murphy, Sarah Conolly, Mary P. O"Sullivan, Sharee A. Basdeo, Seónadh M. O"Leary, Gina Leisching, Joseph Keane, HIV inhibits Warburg metabolism in human macrophages infected with Mycobacterium tuberculosis, 2025, Journal Article, PUBLISHED  DOI
Thong L, Sandby Thomas O, Ó Gallchobhair O, Duffin E, Yennemadi AS, Leisching G, Murphy DM, Nadarajan P, O'Connell F, O'Sullivan MP, Basdeo SA, Cox DJ, Keane J., Dexamethasone inhibits Mycobacterium tuberculosis-induced glycolysis but preserves antimicrobial function in primary human macrophages., Scientific Reports, 15, (1), 2025, p34310 , Journal Article, PUBLISHED  DOI
Aaron M. Walsh, Emma Roycroft, Kate Hinchion, Sharee A. Basdeo, Frederick J. Sheedy, Fiona Crispie, Paul D. Cotter, Anne-Marie McLaughlin, Joseph Keane, Margaret Fitzgibbon, Laura E. Gleeson, Genomic characterisation of recurrent Mycobacterium avium isolates from chronically infected patients reveals patterns of within-host evolution, Genome Medicine, 17, (1), 2025, p120 - 120, p120-120 , Journal Article, PUBLISHED  DOI
Jameson G, Walsh A, Woods R, Batten I, Murphy DM, Connolly SA, Duffin E, O'Gallchobhair O, Nadarajan P, O'Connell F, Gleeson LE, Keane J, Basdeo SA, Human tissue-resident NK cells in the lung have a higher glycolytic capacity than non-tissue-resident NK cells in the lung and blood., Proceedings of the National Academy of Sciences of the United States of America, 2024, Journal Article, PUBLISHED  DOI
Cox DJ, Connolly SA, Ó Maoldomhnaigh C, Brugman AAI, Sandby Thomas O, Duffin E, Gogan KM, Ó Gallchobhair O, Murphy DM, O'Rourke SA, O'Connell F, Keane J, Human airway macrophages are metabolically reprogrammed by IFN-" resulting in glycolysis-dependent functional plasticity., eLife, 2024, Journal Article, PUBLISHED  DOI
  

Page 1 of 4
Sarah Connolly, Sharee A Basdeo, Defining the Role of Th17 Lineage Cells in People with COVID-19, Trinity Student Medical Journal, 2023, Review Article, PUBLISHED
CO Maoldomhnaigh, D Cox, K McQuaid, K Gogan, S Basdeo, J Keane, Lactate improves killing of Mycobacterium tuberculosis in human macrophages, IRISH JOURNAL OF MEDICAL SCIENCE, Dublin, 2019, 2019, Conference Paper, PUBLISHED
DJ Cox, O Sandyby-Thomas, D Murphy, LE Gleeson, SA Basdeo, J Keane, Driving Resolution of Tuberculosis: Ifn-" Induced Plasticity in Human Alveolar Macrophages Can Be Resolved With IL-10: Implications for Macrophage Plasticity as a Therapeutic Target for Tuberculosis, American Thoracic Society, San Diego, USA, May 2024, Conference Paper, PUBLISHED
Sharee Ann Basdeo, James Phelan, Donal Cox, Padraic Dunne, Joseph Keane, Sharee Ann Basdeo Check TCD e-journals IFN-gamma priming utilizes Warburg metabolism to increase human macrophage function and subsequently enhance polyfuctional cytokine production from T cells in response to Mycobacterium tuberculosis, Cytokines 2017, Japan, November 2017, Conference Paper, PUBLISHED

  


Award Date
Nominated as Trinity's favorite Woman in Science 2023 (DU General Science Soc) March 2023
Awarded Excellence in Research Supervision June 2023