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Dr. Nadia Bolshakova

Project Manager (Psychiatry)
TRINITY CENTRE, S J H


  Artificial Intelligence   Biocomputing   Computational Biology   Computer Science/Engineering   Drug discovery   Genetics   Genomes, Genomics   Molecular Biophysics   Molecular informatics
 Irish Molecular Genetics Study in Autism
 . Neurobiology and Treatment of Adolescent Female Conduct Disorder: The Central Role of Emotion Processing (FemNAT-CD)

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Pinto, D., Delaby, E., Merico, D., (...), Betancur, C., Scherer, StephenW., Convergence of Genes and Cellular Pathways Dysregulated in Autism Spectrum Disorders, American Journal of Human Genetics, 94, (5), 2014, p77-694 , Journal Article, PUBLISHED  TARA - Full Text  DOI
Anney R, Klei L, Pinto D, Regan R, Conroy J, Magalhaes TR, Correia C, Abrahams BS, Sykes N, Pagnamenta AT, Almeida J, Bacchelli E, Bailey AJ, Baird G, Battaglia A, Berney T, Bolshakova N, Bölte S, Bolton PF, Bourgeron T, Brennan S, Brian J, Carson AR, Casallo G, Casey J, Chu S, Cochrane L, Corsello C, Crawford EL, Crossett A, Dawson G, de Jonge M, Delorme R, Drmic I, Duketis E, Duque F, Estes A, Farrar P, Fernandez BA, Folstein SE, Fombonne E, Freitag CM, Gilbert J, Gillberg C, Glessner JT, Goldberg J, Green A, Green J, Guter SJ, Hakonarson H, Heron EA, Hill M, Holt R, Howe JL, Hughes G, Hus V, Igliozzi R, Kim C, Klauck SM, Kolevzon A, Korvatska O, Kustanovich V, Lajonchere CM, Lamb JA, Laskawiec M, Leboyer M, Le Couteur A, Leventhal BL, Lionel AC, Liu XQ, Lord C, Lotspeich L, Lund SC, Maestrini E, Mahoney W, Mantoulan C, Marshall CR, McConachie H, McDougle CJ, McGrath J, McMahon WM, Melhem NM, Merikangas A, Migita O, Minshew NJ, Mirza GK, Munson J, Nelson SF, Noakes C, Noor A, Nygren G, Oliveira G, Papanikolaou K, Parr JR, Parrini B, Paton T, Pickles A, Piven J, Posey DJ, Poustka A, Poustka F, Prasad A, Ragoussis J, Renshaw K, Rickaby J, Roberts W, Roeder K, Roge B, Rutter ML, Bierut LJ, Rice JP, Salt J, Sansom K, Sato D, Segurado R, Senman L, Shah N, Sheffield VC, Soorya L, Sousa I, Stoppioni V, Strawbridge C, Tancredi R, Tansey K, Thiruvahindrapduram B, Thompson AP, Thomson S, Tryfon A, Tsiantis J, Van Engeland H, Vincent JB, Volkmar F, Wallace S, Wang K, Wang Z, Wassink TH, Wing K, Wittemeyer K, Wood S, Yaspan BL, Zurawiecki D, Zwaigenbaum L, Betancur C, Buxbaum JD, Cantor RM, Cook EH, Coon H, Cuccaro ML, Gallagher L, Geschwind DH, Gill M, Haines JL, Miller J, Monaco AP, Nurnberger JI, Paterson AD, Pericak-Vance MA, Schellenberg GD, Scherer SW, Sutcliffe JS, Szatmari P, Vicente AM, Vieland VJ, Wijsman EM, Devlin B, Ennis S, Hallmayer J, A genomewide scan for common alleles affecting risk for autism., Human molecular genetics, 19, (20), 2010, p4072-4082 , Journal Article, PUBLISHED  TARA - Full Text  DOI
Supervised and unsupervised machine learning for applications in bioinformatics: An overview of key concepts and critical design problems in, editor(s)G. Babnigg, C.S. Giometti , Bioinformatics for Proteomics, Humana Press Inc., 2007, [Azuaje F., Aguilar-Ruiz J.S., Wang H., Bolshakova N., Ruiz R.], Book Chapter, IN_PRESS
Bolshakova N., Zamolotskikh A., Cunningham P., Comparison of the data-based and gene ontology-based approaches to cluster validation methods for gene microarrays, 19th IEEE Symposium on Computer-Based Medical Systems CBMS'2006, Salt Lake City, USA, 2006, pp539 - 543, Conference Paper, PUBLISHED
Bolshakova N., Azuaje F, Cunningham P. , Incorporating biological domain knowledge into cluster validity assessment, The 4th European Workshop on Evolutionary Computation and Machine Learning in Bioinformatics, EvoBIO 2006, edited by F. Rothlauf , LNCS 3907, Springer-Verlag, 2006, pp13 - 22, Conference Paper, PUBLISHED
Bolshakova N., Azuaje F., Estimating the number of clusters in DNA microarray data, Methods of Information in Medicine, 45, 2006, p153 - 157, Journal Article, PUBLISHED
Bryan K., Cunningham P., Bolshakova N. , Application of simulated annealing to the biclustering of gene expression data, IEEE Transactions on Information Technology on Biomedicine, 10, (3), 2006, p519 - 525, Journal Article, PUBLISHED  TARA - Full Text  DOI  URL
Tsymbal A., Bolshakova N. , Guest editorial on introduction to the special section on mining biomedical data, IEEE Transactions on Information Technology on Biomedicine, 10, (3), 2006, p425 - 428, Journal Article, PUBLISHED
Bryan K., Cunningham P., Bolshakova N. , Biclustering of expression data using simulated annealing, 18th IEEE Symposium on Computer-Based Medical Systems CBMS'2005, 2005, pp383 - 388, Conference Paper, PUBLISHED
Bolshakova, Nadia and Azuaje, Francisco and Cunningham, Pádraig , An integrated tool for microarray data clustering and cluster validity assessment, Bioinformatics, 21, (4), 2005, p451 - 455, Journal Article, PUBLISHED  DOI  URL
  

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Project management, Clinical studies, Life sciences